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dc.contributor.authorPolat, Adem
dc.contributor.authorGökturk, Dilek
dc.date.accessioned2023-05-16T06:36:30Z
dc.date.available2023-05-16T06:36:30Z
dc.date.issued2022en_US
dc.identifier.citationPolat, A., & Göktürk, D. (2022). An alternative approach to tracing the volumic proliferation development of an entire tumor spheroid in 3D through a mini-opto tomography platform. Micron, 152 doi:10.1016/j.micron.2021.103173en_US
dc.identifier.issn0968-4328 / 1878-4291
dc.identifier.urihttps://doi.org/10.1016/j.micron.2021.103173
dc.identifier.urihttps://hdl.handle.net/20.500.12428/4164
dc.description.abstractMicroscopy, which is listed among the major in-situ imaging applications, allows to derive information from a biological sample on the existing architectural structures of cells and tissues and their changes over time. Large biological samples such as tumor spheroids cannot be imaged within one field of view, regional imaging in different areas and subsequent stitching are required to attain the full picture. Microscopy is not typically used to produce full-size visualization of tumor spheroids measuring a few millimeters in size. In this study, we propose a 3D volume imaging technique for tracing the growth of an entire tumor spheroid measuring up to 10 mm using a miniaturized optical (mini-Opto) tomography platform. We performed a primary analysis of the 3D imaging for the MIA PaCa-2 pancreatic tumoroid employing its 2D images produced with the mini-Opto tomography from different angles ranging from -25 ° to +25 ° at six different three-day-apart time points of consecutive image acquisition. These 2D images were reconstructed by using a 3D image reconstruction algorithm that we developed based on the algebraic reconstruction technique (ART). We were able to reconstruct the 3D images of the tumoroid to achieve 800 × 800-pixel 50-layer images at resolutions of 5–25 μm. We also created its 3D visuals to understand more clearly how its volume changed and how it looked over weeks. The volume of the tumor was calculated to be 6.761 mm3 at the first imaging time point and 46.899 mm3 15 days after the first (at the sixth time point), which is 6.94 times larger in volume. The mini-Opto tomography can be considered more advantageous than commercial microscopy because it is portable, more cost-effective, and easier to use, and enables full-size visualization of biological samples measuring a few millimeters in size.en_US
dc.language.isoengen_US
dc.publisherElsevier Ltden_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subject3D bioimagingen_US
dc.subject3D cell cultureen_US
dc.subject3D image reconstructionen_US
dc.subjectAlgebraic reconstruction techniqueen_US
dc.subjectIterative reconstructionen_US
dc.subjectMini-Opto tomographyen_US
dc.subjectTumoroiden_US
dc.titleAn alternative approach to tracing the volumic proliferation development of an entire tumor spheroid in 3D through a mini-Opto tomography platformen_US
dc.typearticleen_US
dc.authorid0000-0002-5662-4141en_US
dc.relation.ispartofMicronen_US
dc.departmentFakülteler, Mühendislik Fakültesi, Elektrik-Elektronik Mühendisliği Bölümüen_US
dc.identifier.volume152en_US
dc.institutionauthorPolat, Adem
dc.identifier.doi10.1016/j.micron.2021.103173en_US
dc.relation.ecinfo:eu-repo/grantAgreement/TUBITAK/SOBAG/119E388
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.authorwosidAAF-6531-2019en_US
dc.authorscopusid57217796734en_US
dc.identifier.wosqualityQ3en_US
dc.identifier.wosWOS:000722316000003en_US
dc.identifier.scopus2-s2.0-85119062441en_US
dc.identifier.pmidPMID: 34785434en_US


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